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Current Probiotics

Editor-in-Chief

ISSN (Print): 2666-6499
ISSN (Online): 2666-6502

Editorial

Exogenous Engraftment: Host-specificity in Probiotic Administration

Author(s): Tyler J. Long*

Volume 1, 2024

Published on: 12 December, 2023

Article ID: e121223224373 Pages: 5

DOI: 10.2174/0126666499268615231127065836

Open Access Journals Promotions 2
[1]
Parfrey LW, Moreau CS, Russell JA. Introduction: The host‐associated microbiome: Pattern, process and function. Mol Ecol 2018; 27(8): 1749-65.
[http://dx.doi.org/10.1111/mec.14706] [PMID: 29727917]
[2]
NIH Office of Dietary Supplements. 2022. Available from: https://ods.od.nih.gov/factsheets/Probiotics-HealthProfessional/
[3]
Gibbons SM. Defining microbiome health through a host lens. mSystems 2019; 4(3): e00155-19.
[http://dx.doi.org/10.1128/mSystems.00155-19] [PMID: 31120028]
[4]
Long TJ. Home-field advantage: Why host-specificity is important for therapeutic microbial engraftment. Microbiol Biotechnol Lett 2023; 51: 124-7.
[http://dx.doi.org/10.48022/mbl.2212.12002]
[5]
Walter J. Murine gut microbiota-diet trumps genes. Cell Host Microbe 2015; 17(1): 3-5.
[http://dx.doi.org/10.1016/j.chom.2014.12.004] [PMID: 25590753]
[6]
Walter J, Maldonado-Gómez MX, Martínez I. To engraft or not to engraft: An ecological framework for gut microbiome modulation with live microbes. Curr Opin Biotechnol 2018; 49: 129-39.
[http://dx.doi.org/10.1016/j.copbio.2017.08.008] [PMID: 28866242]
[7]
Szajewska H, Guarino A, Hojsak I, et al. Use of probiotics for management of acute gastroenteritis: A position paper by the ESPGHAN working group for probiotics and prebiotics. J pediatr gastroenterol nutr 2014; 58(4): 531-9.
[http://dx.doi.org/10.1097/MPG.0000000000000320] [PMID: 24614141]
[8]
Kang DW, Adams JB, Gregory AC, et al. Microbiota transfer therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: an open-label study. Microbiome 2017; 5(1): 10.
[http://dx.doi.org/10.1186/s40168-016-0225-7] [PMID: 28122648]
[9]
Li SS, Zhu A, Benes V, et al. Durable coexistence of donor and recipient strains after fecal microbiota transplantation. Science 2016; 352(6285): 586-9.
[http://dx.doi.org/10.1126/science.aad8852] [PMID: 27126044]
[10]
Chung H, Pamp SJ, Hill JA, et al. Gut immune maturation depends on colonization with a host-specific microbiota. Cell 2012; 149(7): 1578-93.
[http://dx.doi.org/10.1016/j.cell.2012.04.037] [PMID: 22726443]
[11]
Mallott EK, Amato KR. Host specificity of the gut microbiome. Nat Rev Microbiol 2021; 19(10): 639-53.
[http://dx.doi.org/10.1038/s41579-021-00562-3] [PMID: 34045709]
[12]
Brucker RM, Bordenstein SR. The hologenomic basis of speciation: Gut bacteria cause hybrid lethality in the genus Nasonia. Science 2013; 341(6146): 667-9.
[http://dx.doi.org/10.1126/science.1240659] [PMID: 23868918]
[13]
Bron PA, van Baarlen P, Kleerebezem M. Emerging molecular insights into the interaction between probiotics and the host intestinal mucosa. Nat Rev Microbiol 2012; 10(1): 66-78.
[http://dx.doi.org/10.1038/nrmicro2690] [PMID: 22101918]
[14]
Li H, Limenitakis JP, Fuhrer T, et al. The outer mucus layer hosts a distinct intestinal microbial niche. Nat Commun 2015; 6(1): 8292.
[http://dx.doi.org/10.1038/ncomms9292] [PMID: 26392213]
[15]
Smillie CS, Sauk J, Gevers D, et al. Strain-tracking reveals the determinants of bacterial engraftment in the human gut following fecal microbiota transplantation. Cell Host Microbe 2018; 23(2): 229-240.e5.
[http://dx.doi.org/10.1016/j.chom.2018.01.003] [PMID: 29447696]
[16]
Chang CY, Bajić D, Vila JCC, Estrela S, Sanchez A. Emergent coexistence in multispecies microbial communities. Science 2023; 381(6655): 343-8.
[http://dx.doi.org/10.1126/science.adg0727] [PMID: 37471535]
[17]
Ianiro G, Punčochář M, Karcher N, et al. Variability of strain engraftment and predictability of microbiome composition after fecal microbiota transplantation across different diseases. Nat Med 2022; 28(9): 1913-23.
[http://dx.doi.org/10.1038/s41591-022-01964-3] [PMID: 36109637]
[18]
Kristensen NB, Bryrup T, Allin KH, Nielsen T, Hansen TH, Pedersen O. Alterations in fecal microbiota composition by probiotic supplementation in healthy adults: A systematic review of randomized controlled trials. Genome Med 2016; 8(1): 52.
[http://dx.doi.org/10.1186/s13073-016-0300-5] [PMID: 27159972]
[19]
Maldonado-Gómez MX, Martínez I, Bottacini F, et al. Stable engraftment of Bifidobacterium longum AH1206 in the human gut depends on individualized features of the resident microbiome. Cell Host Microbe 2016; 20(4): 515-26.
[http://dx.doi.org/10.1016/j.chom.2016.09.001] [PMID: 27693307]
[20]
Uyeno Y, Shigemori S, Shimosato T. Effect of probiotics/prebiotics on cattle health and productivity. Microbes Environ 2015; 30(2): 126-32.
[http://dx.doi.org/10.1264/jsme2.ME14176] [PMID: 26004794]
[21]
Ramesh D, Vinothkanna A, Rai AK, Vignesh VS. Isolation of potential probiotic Bacillus spp. and assessment of their subcellular components to induce immune responses in Labeo rohita against Aeromonas hydrophila. Fish Shellfish Immunol 2015; 45(2): 268-76.
[http://dx.doi.org/10.1016/j.fsi.2015.04.018] [PMID: 25917974]
[22]
Costello EK, Stagaman K, Dethlefsen L, Bohannan BJM, Relman DA. The application of ecological theory toward an understanding of the human microbiome. Science 2012; 336(6086): 1255-62.
[http://dx.doi.org/10.1126/science.1224203] [PMID: 22674335]
[23]
Seedorf H, Griffin NW, Ridaura VK, et al. Bacteria from diverse habitats colonize and compete in the mouse gut. Cell 2014; 159(2): 253-66.
[http://dx.doi.org/10.1016/j.cell.2014.09.008] [PMID: 25284151]
[24]
Faith JJ, Guruge JL, Charbonneau M, et al. The long-term stability of the human gut microbiota. Science 2013; 341(6141): 1237439.
[http://dx.doi.org/10.1126/science.1237439] [PMID: 23828941]
[25]
Biavati B, Mattarelli P. Bifidobacterium. in Bergey’s Manual of Systematic Bacteriology In: The Actinobacteria. Springer Science & Business Media. 2012; 5: pp. 171-206.
[26]
Walter J. Ecological role of lactobacilli in the gastrointestinal tract: Implications for fundamental and biomedical research. Appl Environ Microbiol 2008; 74(16): 4985-96.
[http://dx.doi.org/10.1128/AEM.00753-08] [PMID: 18539818]
[27]
Sornplang P, Piyadeatsoontorn S. Probiotic isolates from unconventional sources: A review. J Anim Sci Technol 2016; 58(1): 26.
[http://dx.doi.org/10.1186/s40781-016-0108-2] [PMID: 27437119]
[28]
Cummins J, Ho M-W. Genetically modified probiotics should be banned. Microb Ecol Health Dis 2005; 17: 66-8.
[29]
US Food and Drug Administration. Draft guidance for industry: Policy regarding quantitative labeling of dietary supplements containing live microbials. 2018. Available from: https://www.fda.gov/regulatory-information/search-fda-guidance-documents/draft-guidance-industry-policy-regarding-quantitative-labeling-dietary-supplements-containing-live
[30]
Venugopalan V, Shriner KA, Wong-Beringer A. Regulatory oversight and safety of probiotic use. Emerg Infect Dis 2010; 16(11): 1661-5.
[http://dx.doi.org/10.3201/eid1611.100574] [PMID: 21029521]
[31]
US Food and Drug Administration. Drugs Development & Approval Process. FDA. 2023. Available from: https://www.fda.gov/drugs/development-approval-process-drugs
[32]
Olle B. Medicines from microbiota. Nat Biotechnol 2013; 31(4): 309-15.
[http://dx.doi.org/10.1038/nbt.2548] [PMID: 23563425]
[33]
PEDICINI. European Parliament. Parliamentary Question E-004201/2017: Use of the term ‘probiotic’ and nutrition claims. 2017. Available from: https://www.europarl.europa.eu/doceo/document/E-8-2017-004201_EN.html
[34]
Wright A. Regulating the safety of probiotics-the European approach. Curr Pharm Des 2005; 11(1): 17-23.
[http://dx.doi.org/10.2174/1381612053382322] [PMID: 15638749]
[35]
Turck D, Bohn T, Castenmiller J, et al. Safety of pasteurised Akkermansia muciniphila as a novel food pursuant to Regulation (EU) 2015/2283. EFSA J 2021; 19(9): e06780.
[PMID: 34484452]
[36]
European Food Safety Authority. Guidance on the characterisation of microorganisms used as feed additives or as production organisms 2018. Available from: https://www.efsa.europa.eu/en/efsajournal/pub/5206
[37]
Directive 2001/18/EC of the European Parliament and of the Council of 12 March 2001 on the deliberate release into the environment of genetically modified organisms and repealing Council Directive 90/220/EEC - Commission Declaration. OJ L 2001; 106.
[38]
Charbonneau MR, Isabella VM, Li N, Kurtz CB. Developing a new class of engineered live bacterial therapeutics to treat human diseases. Nat Commun 2020; 11(1): 1738.
[http://dx.doi.org/10.1038/s41467-020-15508-1] [PMID: 32269218]
[39]
Shen TCD, Chehoud C, Ni J, et al. Dietary regulation of the gut microbiota engineered by a minimal defined bacterial consortium. PLoS One 2016; 11(5): e0155620.
[http://dx.doi.org/10.1371/journal.pone.0155620] [PMID: 27176607]
[40]
Shen H, Zhao Z, Zhao Z, Chen Y, Zhang L. Native and engineered probiotics: Promising agents against related systemic and intestinal diseases. Int J Mol Sci 2022; 23(2): 594.
[http://dx.doi.org/10.3390/ijms23020594] [PMID: 35054790]
[41]
Russell BJ, Brown SD, Siguenza N, et al. Intestinal transgene delivery with native E. coli chassis allows persistent physiological changes. Cell 2022; 185(17): 3263-3277.e15.
[http://dx.doi.org/10.1016/j.cell.2022.06.050] [PMID: 35931082]
[42]
Slomski A. Postantibiotic microbiome therapeutic reduces C difficile recurrence. JAMA 2022; 327(12): 1118.
[http://dx.doi.org/10.1001/jama.2022.3753] [PMID: 35315889]
[43]
Xia JY, Hepler C, Tran P, Waldeck NJ, Bass J, Prindle A. Engineered calprotectin-sensing probiotics for IBD surveillance in humans. Proc Natl Acad Sci USA 2023; 120(32): e2221121120.
[http://dx.doi.org/10.1073/pnas.2221121120] [PMID: 37523538]
[44]
van de Wijgert JHHM, Verwijs MC, Gill AC, Borgdorff H, van der Veer C, Mayaud P. Pathobionts in the vaginal microbiota: Individual participant data meta-analysis of three sequencing studies. Front Cell Infect Microbiol 2020; 10: 129.
[http://dx.doi.org/10.3389/fcimb.2020.00129] [PMID: 32351902]
[45]
Ma J, Lyu Y, Liu X, et al. Engineered probiotics. Microb Cell Fact 2022; 21(1): 72.
[http://dx.doi.org/10.1186/s12934-022-01799-0] [PMID: 35477497]
[46]
Mazhar SF, Afzal M, Almatroudi A, et al. The prospects for the therapeutic implications of genetically engineered probiotics. J Food Qual 2020; 2020: 1-11.
[http://dx.doi.org/10.1155/2020/9676452]
[47]
Aggarwal N, Breedon AME, Davis CM, Hwang IY, Chang MW. Engineering probiotics for therapeutic applications: Recent examples and translational outlook. Curr Opin Biotechnol 2020; 65: 171-9.
[http://dx.doi.org/10.1016/j.copbio.2020.02.016] [PMID: 32304955]
[48]
Rottinghaus AG, Amrofell MB, Moon TS. Biosensing in smart engineered probiotics. Biotechnol J 2020; 15(10): 1900319.
[http://dx.doi.org/10.1002/biot.201900319] [PMID: 31860168]
[49]
Zhou Y, Han Y. Engineered bacteria as drug delivery vehicles: Principles and prospects. Engineering Microbiology 2022; 2(3): 100034.
[http://dx.doi.org/10.1016/j.engmic.2022.100034]

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