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Contents

Current Bioinformatics, Volume 11 - Number 2


Editorial


Improved Prediction of DNA-Binding Proteins Using Chaos Game Representation and Random Forest

, 11(2): 156 - 163

Xiaohui Niu and Xuehai Hu


DOI: 10.2174/1574893611666160223213853



Analysis of Differential Gene Expression Based on Bayesian Estimation of Variance

, 11(2): 164 - 168

Jiyuan An, John Lai, Lingzao Zeng and Colleen C. Nelson


DOI: 10.2174/1574893611666160125221655



Enhanced Prediction of Small Non-coding RNA in Bacterial Genomes Based on Improved Inter-Nucleotide Distances of Genomes

, 11(2): 169 - 172

Li-Qian Zhou, Rui Li and Liu Hu


DOI: 10.2174/1574893611666160223201114



Protein Folding Kinetic Order Prediction from Amino Acid Sequence Based on Horizontal Visibility Network

, 11(2): 173 - 185

Zhi-Qin Zhao, Zu-Guo Yu, Vo Anh, Jing-Yang Wu and Guo-Sheng Han


DOI: 10.2174/1574893611666160125221326



Global Propagation Method for Predicting Protein Function by Integrating Multiple Data Sources

, 11(2): 186 - 194

Jun Meng, Xin Zhang and Yushi Luan


DOI: 10.2174/1574893611666160125221828



Prioritizing Disease Genes by Using Search Engine Algorithm

, 11(2): 195 - 202

Min Li, Ruiqing Zheng, Qi Li, Jianxin Wang, Fang-Xiang Wu and Zhuohua Zhang


DOI: 10.2174/1574893611666160125220905



Network Propagation Reveals Novel Features Predicting Drug Response of Cancer Cell Lines

, 11(2): 203 - 210

Jiguang Wang, Judith Kribelbauer and Raul Rabadan


DOI: 10.2174/1574893611666160125222144



Applications of Random Walk Model on Biological Networks

, 11(2): 211 - 220

Wei Peng, Jianxin Wang, Zhen Zhang and Fang-Xiang Wu


DOI: 10.2174/1574893611666160223200823



A Markov Clustering Based Link Clustering Method to Identify Overlapping Modules in Protein-Protein Interaction Networks

, 11(2): 221 - 233

Yan Wang, Guishen Wang, Di Meng, Lan Huang, Enrico Blanzieri and Juan Cui


DOI: 10.2174/1574893611666160125222017



Detecting Non-Trivial Protein Structure Relationships

, 11(2): 234 - 242

Aleksandar Poleksic


DOI: 10.2174/1574893610666150624171116



Reconstruction, Topological and Gene Ontology Enrichment Analysis of Cancerous Gene Regulatory Network Modules

, 11(2): 243 - 258

Khalid Raza


DOI: 10.2174/1574893611666160115212806



ORFpred: A Machine Learning Program to Identify Translatable Small Open Reading Frames in Intergenic Regions of the Plasmodium falciparum Genome

, 11(2): 259 - 268

Vivek Srinivas, Mayank Kumar, Santosh Noronha and Swati Patankar


DOI: 10.2174/1574893611666160122221757



Ubipredictor: A New Tool for Species-Specific Prediction of Ubiquitination Sites Using Linear Discriminant Analysis

, 11(2): 269 - 276

Muhammad Saeed, Wajya Ajmal, Anum Masood, M. Rizwan Riaz and Malik Nadeem Akhtar


DOI: 10.2174/1574893611666160122221505



Understanding Effects of Psychological Stress on Physiology and Disease Through Human Stressome - An Integral Algorithm

, 11(2): 277 - 290

Sushri Priyadarshini and Palok Aich


DOI: 10.2174/157489361102160401163021



Suitability of Sequence-Based Feature Vector for Classification Algorithm Improves Accuracy of Human Protein-Protein Interaction Prediction: A Red Blood Cell Case Study

, 11(2): 291 - 300

Afsaneh Maali, Mahmood A. Mahdavi and Reza Gheshlaghi


DOI: 10.2174/1574893610666151026215233




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