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Current Proteomics

Volume 18, 5 Issues, 2021
ISSN: 1875-6247 (Online)
ISSN: 1570-1646 (Print)
This journal supports open access

Aims & Scope

Research in the emerging field of proteomics is growing at an extremely rapid rate. The principal aim of Current Proteomics is to publish well-timed in-depth/mini review articles in this fast-expanding area on topics relevant and significant to the development of proteomics. Current Proteomics is an essential journal for everyone involved in proteomics and related fields in both academia and industry.

Current Proteomics publishes in-depth/mini review articles in all aspects of the fast-expanding field of proteomics. All areas of proteomics are covered together with the methodology, software, databases, technological advances and applications of proteomics, including functional proteomics. Diverse technologies covered include but are not limited to:

  • Protein separation and characterization techniques
  • 2-D gel electrophoresis and image analysis
  • Techniques for protein expression profiling including mass spectrometry-based methods and algorithms for correlative database searching
  • Determination of co-translational and post- translational modification of proteins
  • Protein/peptide microarrays
  • Biomolecular interaction analysis
  • Analysis of protein complexes
  • Yeast two-hybrid projects
  • Protein-protein interaction (protein interactome) pathways and cell signaling networks
  • Systems biology
  • Proteome informatics (bioinformatics)
  • Knowledge integration and management tools
  • High-throughput protein structural studies (using mass spectrometry, nuclear magnetic resonance and X-ray crystallography)
  • High-throughput computational methods for protein 3-D structure as well as function determination
  • Robotics, nanotechnology, and microfluidics

In addition to in-depth/mini reviews, articles highlighting recent proteomics papers of special interest as well as book reviews are published. Mini-reviews and perspective articles are also published. In view of the importance of specific technology and software developed for advancement of proteomics research, a separate section is devoted to product and technology reports. Proceedings of proteomics meetings with selected review articles on topics presented are also published.

Current Proteomics

,

Volume 18

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Number 1



Preface   Open Access



Biography   Open Access



Research Article

Isolation, Identification and In Silico Study of Native Cellulase Producing Bacteria

, 18(1): 3 - 11

Farzane Kargar, Mojtaba Mortazavi*, Mahmood Maleki, Masoud Torkzadeh Mahani, Younes Ghasemi and Amir Savardashtaki*


DOI: 10.2174/1570164617666191127142035








Research Article

Association of Mutations in the NS5A-PKRBD Region and IFNL4 Genotypes with Hepatitis C Interferon Responsiveness and its Functional and Structural Analysis

, 18(1): 38 - 49

Tayebeh Hashempour*, Behzad Dehghani, Zahra Mousavi, Tahereh Akbari, Zahra Hasanshahi, Javad Moayedi, Maryam Yahaghi and Mohammad Ali Davarpanah*


DOI: 10.2174/1570164617666200107091124




Current Proteomics, Volume 18 (2021) - Number 2


This issue is in progress but contains articles that are final and fully citable.

Articles Ahead of Print



A Bottom-up Proteomic Approach in Bone Marrow Plasma Cells of Newly Diagnosed Multiple Myeloma Patients


Beycan Ayhan, Seçil Karahisar Turan, N. Pınar Barkan, Klara Dalva, Meral Beksaç and Duygu Özel Demiralp*


DOI: 10.2174/1570164617999201124142232
View Abstract






Bioinformatics-based Characterization of Proteins Related to SARS-CoV- -2 Using the Polarity Index Method® (PIM®) and Intrinsic Disorder Predisposition


Carlos Polanco*, Vladimir N. Uversky, Guy W. Dayhoff II, Alberto Huberman, Thomas Buhse, Manlio F. Márquez, Gilberto Vargas-Alarcón, Jorge Alberto Castañón-González, Leire Andrés, Juan Luciano Dı́az-González and Karina González-Bañales


DOI: 10.2174/1570164618666210106114606
View Abstract


Proteomic Analysis of Intra- and Extracellular Proteins of Aspergillus Niveus During Submerged Bioprocess Culturing Under Different pH Conditions


Juliana Abigail Leite, Nathalia Gonsales da Rosa-Garzon, Helen Julie Laure, José Cesar Rosa, Octavio Luiz Franco, Cristina Maria de Souza Motta and Hamilton Cabral*


DOI: 10.2174/1570164617999201202120657
View Abstract


Curcumin Reverts the Protein Differential Expression in the Liver of the Diabetic Obese db/db Mice


Oscar Gerardo Silva-Gaona, Juan Manuel Guzmán-Flores, Magdalena Hernández-Ortiz, Katya Vargas-Ortiz, Joel Ramírez-Emiliano, Sergio Encarnación-Guevara and Victoriano Pérez-Vázquez*


DOI: 10.2174/1570164618666210114112642
View Abstract


Abstracts Ahead of Print




Characterization of proteins from putative human DNA and RNA viruses.


Carlos Polanco*, Vladimir N. Uversky, Gilberto Vargas-Alarcón, Thomas Buhse, Alberto Huberman, Manlio F. Márquez and Leire Andrés


DOI: 10.2174/1570164618666210212123850
View Abstract


The epidemiological and pangenome landscape of Staphylococcus aureus and identification of conserved novel candidate vaccine antigens


Kanwal Naz , Nimat Ullah, Anam Naz, Sidra Irum, Hamza Arshad Dar, Tahreem Zaheer, Fatima Shahid and Amjad Ali *


DOI: 10.2174/1570164618666210212122847
View Abstract




Proteomic Technologies and their Application for Ensuring Meat Quality, Safety and Authenticity


Rituparna Banerjee, Naveena Basappa Maheswarappa*, Kiran Mohan, Subhasish Biswas and Subhasish Batabyal


DOI: 10.2174/1570164618666210114113306
View Abstract


Published Contents

Editor's Choice





Cell Penetrating Peptide: Sequence-Based Computational Prediction for Intercellular Delivery of Arginine Deiminase

, 2020; 17(2): 117 - 131

Mahboubeh Zarei, Mohammad Reza Rahbar, Manica Negahdaripour, Mohammad Hossein Morowvat, Navid Nezafat* and Younes Ghasemi*


DOI: 10.2174/1570164616666190701120351



Role of Cervical Cancer Radiotherapy in the Expression of EGFR and p53 Gene

, 2020; 17(1): 23 - 29

Yan Cheng, Kuntian Lan, Xiaoxia Yang, Dongxia Liang, Li Xia and Jinquan Cui*


DOI: 10.2174/1570164616666190204155403



Protein Subcellular Localization Prediction based on PSI-BLAST Profile and Principal Component Analysis

, 2019; 16(5): 402 - 414

Yuhua Yao*, Manzhi Li, Huimin Xu, Shoujiang Yan, Pingan He, Qi Dai, Zhaohui Qi and Bo Liao


DOI: 10.2174/1570164616666190126155744




Assessment of Signal Peptides to Optimize Interleukin 2 (IL-2) Folding and Expression

, 2019; 16(3): 188 - 198

Narges Nazifi, Mojtaba Tahmoorespur*, Mohammad Hadi Sekhavati*, Alireza Haghparast and Mohammad Ali Behroozikhah


DOI: 10.2174/1570164615666181024113612



Proteomic Analysis of Cerebrospinal Fluid: A Search for Biomarkers of Neuropsychiatric Systemic Lupus Erythematosus

, 2019; 16(2): 110 - 118

Johanna Pedroza-Díaz*, Tania Paola Luján Chavarria, Carlos Horacio Muñoz Vahos, Diego Francisco Hernández Ramírez, Elizabeth Olivares-Martínez, Gloria Vásquez, Luis Llorente, Hilda Fragoso-Loyo, Sarah Röthlisberger and Blanca Lucía Ortiz Reyes


DOI: 10.2174/1570164615666180911125252



Open Access Articles


Proteomic Analysis of Aqueous Humor Proteins Associated with Neovascular Glaucoma Secondary to Proliferative Diabetic Retinopathy

, 2021; 18: 1 - 13 (E-Pub Ahead of Print)

Ying Wang*, Shaolin Xu, Junyi Li, Fujie Yuan, Yue Chen and Kelin Liu




Role of Cervical Cancer Radiotherapy in the Expression of EGFR and p53 Gene

, 2020; 17(1): 23 - 29

Yan Cheng, Kuntian Lan, Xiaoxia Yang, Dongxia Liang, Li Xia and Jinquan Cui*






B-factor Analysis and Conformational Rearrangement of Aldose Reductase

, 2014; 11(3): 151 - 160

Ganesaratnam K. Balendiran, J. Rajendran Pandian, Evin Drake, Anubhav Vinayak, Malkhey Verma and Duilio Cascio




Important Anti-Cancer Applications of Protein Based Nanoparticles

, 2013; 10(4): 334 - 340

Mustafa Ergul, Merve Ergul and Yusuf Tutar*




A Simple Protein Extraction Method for Proteomic Analysis of Diverse Biological Specimens

, 2013; 10(4): 298 - 311

Panga Jaipal Reddy, Aishwarya Anand Rao, Darpan Malhotra, Samridhi Sharma, Ravinder Kumar, Rekha Jain, Kishore Gollapalli, Namita Pendharkar, Srikanth Rapole and Sanjeeva Srivastava




Anti-cancer Therapies in High Grade Gliomas

, 2013; 10(3): 246 - 260

Cristiana Pistol Tanase, Ana-Maria Enciu, Simona Mihai, Ana Iulia Neagu, Bogdan Calenic and Maria Linda Cruceru




Protein Biomarkers in Cancers of the Digestive Tract - a Step Towards Personalized Medicine

, 2013; 10(3): 228 - 236

Erno Duda, Elena Codrici, Daniela Ionela Popescu, Laura Necula and Radu Albulescu





Neuro-endocrine Markers in Neoplasms. Diagnostic Interest and Future Prospects

, 2013; 10(3): 194 - 201

Gianni Bussolati, Carmen Ardeleanu and Maria Comanescu




Protein Arrays: Recent Achievements and their Application to Study the Human Proteome

, 2013; 10(2): 83 - 97

Juan Casado-Vela, Maria Gonzalez-Gonzalez, Sergio Matarraz, Maria Jose Martinez-Esteso, Maite Vilella, Jose Maria Sayagues, Manuel Fuentes and Juan Carlos Lacal




MALDI Imaging Mass Spectrometry – A Novel Approach in Biomedical Research of Tissues

, 2013; 10(2): 76 - 82

Magdalena Kalinowska-Herok, Monika Pietrowska, Anna Walaszczyk and Piotr Wid ak




A Quantitative Proteomics Approach in the Study of MicroRNA 181a in HepG2 Cells

, 2012; 9(4): 262 - 271

Yi Lin Jane Tan, Nagy A. Habib and Wei Ning Chen





Most Cited Articles


Research Article

Antibody development to HCV alternate reading frame protein in liver transplant candidate and its computational analysis

, 2020; 17(2): 154-170.

Zahra Musavi, Tayebeh Hashempour*, Javad Moayedi, Behzad Dehghani, Farzaneh Ghassabi, Mehrdad Hallaji, Seyed Younes Hosseini, Ramin Yaghoubi , Siavash Gholami, Mohamad Ali Dehyadegari and Shahin Merat


DOI: 10.2174/1570164617666190822103329


Research Article

Computational analysis of therapeutic enzyme uricase from different source organisms

, 2020; 17(1): 59-77.

Anand Kumar Nelapati and JagadeeshBabu PonnanEttiyappan*


DOI: 10.2174/1570164616666190617165107


Research Article

Association of mutations in the ns5a-pkrbd region and ifnl4 geno-types with hepatitis c interferon responsiveness and its functional and structural analysis

, 2021; 18(1): 38-49.

Tayebeh Hashempour*, Behzad Dehghani, Zahra Mousavi, Tahereh Akbari, Zahra Hasanshahi, Javad Moayedi, Maryam Yahaghi and Mohammad Ali Davarpanah*


DOI: 10.2174/1570164617666200107091124





Research Article

Computational analysis of arginine deiminase sequences to provide a guideline for protein engineering

, 2020; 17(2): 132-146.

Mahboubeh Zarei, Mohammad Reza Rahbar, Navid Nezafat, Manica Negahdaripour, Mohammad Hossein Morowvat and Younes Ghasemi*


DOI: 10.2174/1570164616666190619111852


Research Article

Cell penetrating peptide: Sequence-based computational prediction for intercellular delivery of arginine deiminase

, 2020; 17(2): 117-131.

Mahboubeh Zarei, Mohammad Reza Rahbar, Manica Negahdaripour, Mohammad Hossein Morowvat, Navid Nezafat* and Younes Ghasemi*


DOI: 10.2174/1570164616666190701120351


Research Article

Analysis of extracellular proteome of Staphylococcus aureus: A mass spectrometry based proteomics method of exotoxin characterisation

, 2020; 17(1): 3-9.

Rajdeep Das, Nisha D`souza, Surya K. Choubey, Sethumadhavan Murlidharan, Anura V. Kurpad and Amit K. Mandal*


DOI: 10.2174/1570164616666190204160627


Research Article

Label-free mass spectrometry-based plasma proteomics identified ly6d, dsc3, cdsn, serpinb12, and slurp1 as novel protein biomarkers for pulmonary tuberculosis

, 2021; 18(1): 50-61.

Lu Zhang, Hualin Wang, Na Li, Peng Hu, Zhaoqin Zhu, Wei Wang, Yanzheng Song, Zilu Wen, Xiaoli Yu* and Shulin Zhang*


DOI: 10.2174/1570164617666191210105122



Research Article

Comparative studies on phospholipase a2 as a marker for gut microbio-ta-liver-brain axis in a rodent model of autism

, 2021; 18(2): 169-177.

Abeer Al-Dbass, Abir Ben Bacha, Nadine MS Moubayed, Ramesa Shafi Bhat, Manar Al-Mutairi, Osima M. Alnakhli, Majidh Al-Mrshoud, Hanan Alfawaz, Maha Daghestani and Afaf El-Ansary*


DOI: 10.2174/1570164617999200519100634


Research Article

Soy protein remnants digested by gastro-duodenal proteases can alter microbial interactions and intestinal cholesterol absorption

, 2021; 18(2): 212-223.

Juyoung Lee , Yujin Yum , Sung-hee Kim , Dorsilla Anono Katimbwa and Jinkyu Lim *


DOI: 10.2174/1570164617666200305113924


Research Article

Prediction of prophylactic peptide vaccine candidates for human papillo-mavirus (Hpv): Immunoinformatics and reverse vaccinology approaches

, 2021; 18(2): 178-192.

Mehreen Ismail, Zureesha Sajid, Amjad Ali, Xiaogang Wu, Syed Aun Muhammad* and Rehan Sadiq Shaikh*


DOI: 10.2174/1570164617999200505095802



Most Accessed Articles


Bioinformatics-based Identification of Proteins Expressed by Arthropod- borne Viruses Transmitted by Aedes Aegypti Mosquito

, 2021; 18(1): 81-94.

Carlos Polanco*, Vladimir N. Uversky, Alberto Huberman, Leire Andrés, Thomas Buhse, Jorge Alberto Castañón-González and Alma Fernanda Sánchez-Guerrero


DOI: 10.2174/1570164617999200422123618


Proteomic Analysis of the Vitreous Body in Proliferative and Non-Proliferative Diabetic Retinopathy

, 2021; 18(2): 143-152.

Van-An Duong, Jeeyun Ahn, Na-Young Han, Jong-Moon Park, Jeong-Hun Mok, Tae Wan Kim* and Hookeun Lee*


DOI: 10.2174/1570164617666200302101442





Comparative Studies on Phospholipase A2 as a Marker for Gut Microbiota- liver-brain Axis in a rodent Model of Autism

, 2021; 18(2): 169-177.

Abeer Al-Dbass, Abir Ben Bacha, Nadine MS Moubayed, Ramesa Shafi Bhat, Manar Al-Mutairi, Osima M. Alnakhli, Majidh Al-Mrshoud, Hanan Alfawaz, Maha Daghestani and Afaf El-Ansary*


DOI: 10.2174/1570164617999200519100634



Phosphoproteomic Analysis of Spiroplasma eriocheiris and Crosstalk with Acetylome Reveals the Role of Post-Translational Modifications in Metabolism

, 2020; 17(5): 392-403.

Peng Liu, Libo Hou, Min Liu, Xuechuan Xu, Qi Gao, Jiewen Deng, Shasha Xiang, Qian Cao, Min Zhou, Quanjie Yang, Wen Wang, Wei Gu* and Qingguo Meng*


DOI: 10.2174/1570164617666191017140456




Multi-Epitope Vaccines (MEVs), as a Novel Strategy Against Infectious Diseases

, 2020; 17(5): 354-364.

Mohammad Mahmoudi Goumari , Ibrahim Farhani, Navid Nezafat and Shirin Mahmoodi*


DOI: 10.2174/1570164617666190919120140


Association of Mutations in the NS5A-PKRBD Region and IFNL4 Genotypes with Hepatitis C Interferon Responsiveness and its Functional and Structural Analysis

, 2021; 18(1): 38-49.

Tayebeh Hashempour*, Behzad Dehghani, Zahra Mousavi, Tahereh Akbari, Zahra Hasanshahi, Javad Moayedi, Maryam Yahaghi and Mohammad Ali Davarpanah*


DOI: 10.2174/1570164617666200107091124






Editor-in-Chief

graphic
Ajoy Basak
Ottawa Hospital Research Institute
University of Ottawa
Ottawa, ON
(Canada)
Biography
View Full Editorial Board

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Journal History

Current Proteomics was launched in 2004. Dr. Ajoy Basak serves as the Editor-in-Chief of the journal.
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