ISSN: 2212-392X (Online)
ISSN: 1574-8936 (Print)

Volume 11, 5 Issues, 2016

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Current Bioinformatics

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Yi-Ping Phoebe Chen
Department of Computer Science and Information Technology
La Trobe University

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Upcoming Articles (E-Pub Abstracts ahead of Print)

Using Quadratic Discriminant Analysis to Predict Protein Secondary Structure Based on Chemical Shifts

Feng Yonge, li zheyuan, kou gaoshan and Zhao Wei.

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Implication on the function of novel Xn-relE toxin structure of Xenorhabdus nematophila using Homology modeling

Lalit Kumar Gautam, Raghu M Yennamalli and Jitendra Singh Rathore.

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MetalExplorer, a Bioinformatics Tool for the Improved Prediction of Eight Types of Metal-binding Sites Using a Random Forest Algorithm with Two-step Feature Selection

Jiangning Song, Chen Li, Cheng Zheng, Jerico Revote, Ziding Zhang and Geoffrey I Webb.

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Identification of drug-drug interactions using chemical interactions

Lei Chen, Chen Chu, Yu-Hang Zhang, Mingyue Zheng, LiuCun Zhu, XiangYin Kong and Tao Huang.

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An HMM-based Text Classier Less Sensitive to Document Management Problems

A. Seara Vieira, E. L. Iglesias and L Borrajo.

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An Agent-Based Model to Associate Genomic and Environmental Data for Phenotypic Prediction in Plants

Sebastien Alameda, Jean-Pierre Mano, Carole Bernon and Sebastien Mell.

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Reconstruction of the Network of Experimentally Validated AMP-Drug Combinations against Pseudomonas aeruginosa Infections

Paula Jorge, Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Maria Olívia Pereira and Anália Lourenço.

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Biological Network Derivation by Positive Unlabeled Learning Algorithms

Doruk Pancaroglu and Mehmet Tan.

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An insight into species from same descendent aspect and the application into Clostridia

Zhenjia Wang, Chuan Zhou, Zheng Chang, Bingqiang Liu, Qin Ma and Guojun Li.

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Gene Selection Using High Dimensional Gene Expression Data: An Appraisal

Abhishek Bhola and Shailendra Singh.

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Cancer diagnosis from isomiR expression with machine learning method

Zhijun Liao, Quan Zou, Dapeng Li, Lisheng Li and Xinrui Wang.

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Discriminating Ramos and Jurkat Cells with Image Textures from Diffraction Imaging Flow Cytometry Based on a Support Vector Machine

Ning Zhang, Yu Sa, Yu Guo, Lin Wang, Ping Wang and Yuanming Feng.

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Euler String-Based Compression of Tree-structured Data and its Application to Analysis of RNAs 1

Liwei Liu, Tomoya Mori, Yang Zhao, Morihiro Hayashida and Tatsuya Akutsu.

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Genome-wide cloning, bioinformatic analysis and expression pattern of phospholipase D gene family in Vitis vinifera

Qimin Chen, Sibao Wan, Dan Yu, Weidong Huang and Jicheng Zhan.

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Analysis and prediction of nitrated tyrosine sites with mRMR method and support vector machine algorithm

Jing Lu, Shao Peng Wang, Yu-Dong Cai and Qing Zhang.

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Network-Based Classification of Molecular Cytogenetic Data

Yuri B Yurov, Svetlana G Vorsanova and Ivan Y Iourov.

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First molecular cytogenetic characterization of murine malignant mesothelioma cell line AE17 and in silico translation to the human genome

Eva Kubicova, Vladimir Trifonov, Fran Borovecki, Thomas Liehr, Martina Rincic, Nadezda Kosyakova and Shaymaa S Hussein.

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Circadian clock gene of grass carp (Ctenopharyngodon idellus): genomic structure and tissue expression pattern of period1 gene

Yuhui He, Xu-fang Liang, Shan He, Xiaochen Yuan, Qingchao Wang, Wenjing Cai and Longfang Sun.

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The complexity of promoter regions based on a vector topological entropy

Shuilin Jin, Zhuo Wang, Junyu Lin, Jia Wang, Xiurui Zhang, Renjie Tan, Chuanbin Zhang, Zhe Wang, Wanqian Guo and Li Xu.

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An Analytical RNA Secondary Structure Benchmark for the RNA Inverse Folding Problem

J. Mohammadzadeh, M. Ganjtabesh and A Nowzari-Dalini.

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Using the residue interaction network improve the classification of thermophilic and mesophilic proteins

Xiaomei Gao and Yanrui Ding.

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Overcoming the limitation of GWAS platforms using systems biology approach

Budheswar Dehury, Santosh Kumar Behera and Sapna Negi.

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GPU-based Acceleration of ECG Characterization using High-Order Hermite Polynomials

A. Gil, D. G. Márquez, G. Caffarena, A. Iriarte and A Otero.

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ECMSRC: A Sparse Learning Approach for the Prediction of Extracellular Matrix Proteins

Imran Naseem, Shujaat Khan, Roberto Togneri and Mohammed Bennamoun.

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Content-Based Search on Time-Series Microarray Databases using Cluster-Based Fingerprints

Esma Erguner Ozkoc and Hasan Ogulc.

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Functional Prediction: Gene Filtering based on Multivariate Techniques

Francisco Torres-Avil´es, Rosa Monta˜no and Liliana L'opez-Kleine.

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A Novel Method for Better Bacterial Genome Assembly from Illumina data

Peixiang Ni, Wenkui Dai, Yongfeng Liu, Zhenyu Yang, Tao Zhou, Shuqing Liang, Tong Wang, Jing Xu and Yun Zhao.

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Genomic Islands of Mannheimia Haemolytica – In Silico Analysis

Relangi Tulasi Rao and Kannan Jayakumar.

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Computer Representations of Bioinformatics Models

Tomasz Prejzendan, Szymon Wasik and Jacek Blazewicz.

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Evaluation of Selected DNA Spectral Analysis-Based Gene Prediction Techniques

Sajid A. Marhon and Stefan C Kremer.

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A Review of Gene Selection Tools in Classifying Cancer Microarray Data

Tham Wen Shi, Wong Sou Kah, Mohd Saberi Mohamad, Kohbalan Moorthy, Safaai Deris, Muhammad Farhan Sjaugi, Sigeru Omatu, Juan Manuel Corchado and Shahreen Kasim.

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Application of the Enhanced Replacement Method and Ensemble Learning for the Prediction of BCRP/ABCG2 Substrates

Melisa E. Gantner, Lucas N. Alberca, Andrew G. Mercader, Luis E. Bruno-Blanch and Alan Talevia.

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Identifying Key Regulator Genes for Tuberculosis by Differential Co-expression Analysis of Gene Expression Profiling

Jingming Liu, Wei Wang, Joy Fleming, Lijun Bi, Mengqiu Gao and Chuanyou Li.

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Fast and Practical Algorithms for Searching the Gapped Palindromes

Shivika Gupta, Rajesh Prasad and Sunita Yadav.

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Reverse Vaccinology: An Epitope Based Approach to Design Vaccines

Mehak Dangi, Bharat Singh and Anil Kumar Chhillar.

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A Classification Method for Microarrays Based on Diversity

Xubo Wang, Xiangxiang Zeng, Ying Ju, Yi Jiang, Zhujin Zhang and Wenqiang Chen.

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